GSM1095215: M. kandleri sRNAs +T4PNK +ATP; Methanopyrus kandleri AV19... - SRA

SRX247371: GSM1095215: M. kandleri sRNAs +T4PNK +ATP; Methanopyrus kandleri AV19; RNA-Seq
6 ILLUMINA (Illumina HiSeq 2000) runs: 20.6M spots, 2G bases, 1.1Gb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: Methanopyrus kandleri small RNA analysis

PRJNA192683 • SRP019041 • All experiments • All runs

show Abstracthide Abstract

We report the profiling of small RNAs from Methanopyrus kandleri by high throughput sequencing. Over 83 million Illumina Hi Seq2000 reads were obtained for six independent RNA libraries. The reads were mapped to the M. kandleri AV19 genome (Genbank: NC_003551, 1694969 bp). The small RNome of M. kandleri was analyzed. Overall design: Analysis of small RNome from six Methanopyrus kandleri RNA samples

Sample: M. kandleri sRNAs +T4PNK +ATP

SAMN01942130 • SRS399342 • All experiments • All runs

Organism: Methanopyrus kandleri AV19

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: size fractionation

Layout: SINGLE

Experiment attributes:

GEO Accession: GSM1095215

Links:

External link: GEO Sample

NCBI link: NCBI Entrez (gds)

Runs: 6 runs, 20.6M spots, 2G bases, 1.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR769483	4,000,000	388M	225.2Mb	2013-05-03
SRR769484	4,000,000	388M	230.2Mb	2013-05-03
SRR769485	4,000,000	388M	227.4Mb	2013-05-03
SRR769486	4,000,000	388M	226.8Mb	2013-05-03
SRR769487	4,000,000	388M	227.8Mb	2013-05-03
SRR769488	609,362	59.1M	36.7Mb	2013-05-03

ID:: 340519

SRA

Sequence Read Archive

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